Journal of Molecular Graphics and Modelling, Volume (101), No (1), Year (2020-12) , Pages (107733-107733)

Title : ( The effect of anion on aggregation of amino acid ionic liquid: Atomistic simulation )

Authors: Hanieh Nadimi , Mohammad Reza Housaindokht , Fatemeh Moosavi ,

Citation: BibTeX | EndNote

Abstract

Aggregation behavior of dodecyl betaine chloride [DB][Cl], as an amino acid ionic liquid, and dodecyl betaine N-acetyl glycinate [DB][AG], as a bio ionic liquid, in aqueous media was studied through molecular dynamics simulation. The aggregating was investigated by radial distribution function, coordination numbers, and hydrogen bond numbers. The results demonstrated the hydrogen bond between [DB]þ and [AG]- that leads to aggregation. The number of hydrogen bonds of [DB][AG] is greater than [DB][Cl] and causes a decrease in the gradient of the mean square displacement, thereby the diffusion coefficient of cation, anion, and water in [DB][AG]. The results point to a stable aggregation of [DB][AG] which is in agreement with the results of root mean square deviations. The aggregation number for [DB][AG] is 50 and 44 for [DB][Cl]. Computing the radius of gyration and geometrical radius shows that the aggregation size is 23.0 Å and 26.4 Å for [DB][AG] and [DB][Cl], respectively. It was also observed that the shape of the aggregates is quasi-spherical that points to a sub-diffusive regime.

Keywords

Aggregation size Amino acid ionic liquid Bio ionic liquid Radius of gyration Molecular dynamics simulation Diffusivity regime parameter
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@article{paperid:1081161,
author = {Nadimi, Hanieh and Housaindokht, Mohammad Reza and Moosavi, Fatemeh},
title = {The effect of anion on aggregation of amino acid ionic liquid: Atomistic simulation},
journal = {Journal of Molecular Graphics and Modelling},
year = {2020},
volume = {101},
number = {1},
month = {December},
issn = {1093-3263},
pages = {107733--107733},
numpages = {0},
keywords = {Aggregation size Amino acid ionic liquid Bio ionic liquid Radius of gyration Molecular dynamics simulation Diffusivity regime parameter},
}

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%0 Journal Article
%T The effect of anion on aggregation of amino acid ionic liquid: Atomistic simulation
%A Nadimi, Hanieh
%A Housaindokht, Mohammad Reza
%A Moosavi, Fatemeh
%J Journal of Molecular Graphics and Modelling
%@ 1093-3263
%D 2020

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