شانزدهمین کنگره ملی و هفتمین کنگره بین المللی بیوشیمی و بیولوژی مولکولی , 2020-11-09

Title : ( Determination of kinetic and thermodynamic parameters of amyloid-b 1-42 interaction with astaxanthin )

Authors: Moharram dehghany , Razieh Jalal , Mohammad-Reza Rashidi ,

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Abstract

Background: The abnormal folding and aggregation of the amyloid-β is a hallmark of neurodegenerative disorders such as Alzheimer’s disease (AD). The use of natural compounds with anti-aggregation properties is an attractive strategy to treat the neurodegenerative diseases. Astaxanthin (ATX), a xanthophyll carotenoid with powerful antioxidant activity, has been found to have the protective effect on amyloid β (Aβ) aggregation. The aim of this study was to obtain the kinetic and thermodynamic parameters of ATX interaction with Aβ1-42. Methods: For this purpose, Aβ1-42 was immobilized on the activated surface plasmon resonance (SPR) gold chip surface and then ATX at various concentrations (1-25 μM) was injected with flow rate 30 μl/min for 2 min. The values of arbitrary response unit (RU) were determined at four different temperatures. The dissociation (kd) and association (ka) rate constants were calculated using the SPR Navi™ Data viewer and Trace Drawer™ Software. The Gibbs energy change (ΔG°), enthalpy change (ΔH°), and entropy change (ΔS°) were estimated from van’t Hoff analysis. Results: The negative values of ΔH° (-165.72 kJ mol−1) and ΔS° (-658.63 J mol−1 K-1) suggested that the hydrogen bonds and van der waals interactions were the main forces governing Aβ1-42/ATX interaction. The SPR results also showed that the binding of ATX to Aβ1-42 is a non-spontaneous, exothermic and enthalpy-driven process with KD= 0.31 × 10-6 M at 310 K. Furthermore, the docking of Aβ1-42 structures (PDB IDs: 1IYT, 1Z0Q, and 5OQV) with ATX (extracted from PDB ID: 1GKA) were performed using AutoDock Vina and LigPlot+ molecular docking software. The docking results revealed that hydrophobic and hydrogen bond forces have an important role in the interaction of Aβ1–42 with ATX. Conclusion: Overall, Aβ1–42 seems to have high affinity with ATX and this binding is temperature-independent over the temperature range (298-310 K).

Keywords

, Keywords: Amyloid β-peptide1-42 (Aβ1-42), Astaxanthin, Molecular docking, Surface plasmon resonance, Neurodegenerative diseases.
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@inproceedings{paperid:1083725,
author = {Dehghany, Moharram and Jalal, Razieh and محمدرضا رشیدی},
title = {Determination of kinetic and thermodynamic parameters of amyloid-b 1-42 interaction with astaxanthin},
booktitle = {شانزدهمین کنگره ملی و هفتمین کنگره بین المللی بیوشیمی و بیولوژی مولکولی},
year = {2020},
location = {تهران, IRAN},
keywords = {Keywords: Amyloid β-peptide1-42 (Aβ1-42); Astaxanthin; Molecular docking; Surface plasmon resonance; Neurodegenerative diseases.},
}

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%0 Conference Proceedings
%T Determination of kinetic and thermodynamic parameters of amyloid-b 1-42 interaction with astaxanthin
%A Dehghany, Moharram
%A Jalal, Razieh
%A محمدرضا رشیدی
%J شانزدهمین کنگره ملی و هفتمین کنگره بین المللی بیوشیمی و بیولوژی مولکولی
%D 2020

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