Scientific Reports, Volume (12), No (1), Year (2022-8)

Title : ( A novel causative functional mutation in GATA6 gene is responsible for familial dilated cardiomyopathy as supported by in silico functional analysis )

Authors: Afrouz Khazamipour , Nazanin Gholampour Faroji , Tina Zeraati , Farveh Vakilian , Aliakbar Haddad-Mashadrizeh , Majid Ghayour Mobarhan , Alireza Pasdar ,

Citation: BibTeX | EndNote

Abstract

Dilated cardiomyopathy (DCM), one of the most common types of cardiomyopathies has a heterogeneous nature and can be seen in Mendelian forms. Next Generation Sequencing is a powerful tool for identifying novel variants in monogenic disorders. We used whole-exome sequencing (WES) and Sanger sequencing techniques to identify the causative mutation of DCM in an Iranian pedigree. We found a novel variant in the GATA6 gene, leading to substituting Histidine by Tyrosine at position 329, observed in all affected family members in the pedigree, whereas it was not established in any of the unaffected ones. We hypothesized that the H329Y mutation may be causative for the familial pattern of DCM in this family. The predicted models of GATA6 and H329Y showed the high quality according to PROCHECK and ERRAT. Nonetheless, simulation results revealed that the protein stability decreased after mutation, while the flexibility may have been increased. Hence, the mutation led to the increased compactness of GATA6. Overall, these data indicated that the mutation could affect the protein structure, which may be related to the functional impairment of GATA6 upon H329Y mutation, likewise their involvement in pathologies. Further functional investigations would help elucidating the exact mechanism.

Keywords

, FDCM, NGS, WES, SCD, LVEF, LVEDD
برای دانلود از شناسه و رمز عبور پرتال پویا استفاده کنید.

@article{paperid:1090997,
author = {Afrouz Khazamipour and Nazanin Gholampour Faroji and Tina Zeraati and Farveh Vakilian and Haddad-Mashadrizeh, Aliakbar and Majid Ghayour Mobarhan and Alireza Pasdar},
title = {A novel causative functional mutation in GATA6 gene is responsible for familial dilated cardiomyopathy as supported by in silico functional analysis},
journal = {Scientific Reports},
year = {2022},
volume = {12},
number = {1},
month = {August},
issn = {2045-2322},
keywords = {FDCM; NGS; WES; SCD; LVEF; LVEDD},
}

[Download]

%0 Journal Article
%T A novel causative functional mutation in GATA6 gene is responsible for familial dilated cardiomyopathy as supported by in silico functional analysis
%A Afrouz Khazamipour
%A Nazanin Gholampour Faroji
%A Tina Zeraati
%A Farveh Vakilian
%A Haddad-Mashadrizeh, Aliakbar
%A Majid Ghayour Mobarhan
%A Alireza Pasdar
%J Scientific Reports
%@ 2045-2322
%D 2022

[Download]